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Omics Standard Operating Procedures

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This living document will illustrate Standard Operating Procedures (SOPs) for sampling biofilm material from reverse osmosis (RO) membrane modules. The SOPs will empower the NAWI research community to apply omics tools (e.g., time-series metagenomic, meta-transcriptomic, metaproteomic and metabolomic workflows) to fundamentally understand biofilm formation with unprecedented resolution (e.g., the transition from innocuous to detrimental biofilm) and mitigate biofouling in water treatment and distribution systems.

Citation Formats

TY - DATA AB - This living document will illustrate Standard Operating Procedures (SOPs) for sampling biofilm material from reverse osmosis (RO) membrane modules. The SOPs will empower the NAWI research community to apply omics tools (e.g., time-series metagenomic, meta-transcriptomic, metaproteomic and metabolomic workflows) to fundamentally understand biofilm formation with unprecedented resolution (e.g., the transition from innocuous to detrimental biofilm) and mitigate biofouling in water treatment and distribution systems. AU - May, Amanda A2 - Stadler, Lauren A3 - Podar, Mircea A4 - Kumar, Manish A5 - Alvarez, Pedro DB - Open Energy Data Initiative (OEDI) DP - Open EI | National Renewable Energy Laboratory DO - KW - NAWI KW - desalination KW - water KW - Biofilms KW - Omics analyses KW - SOPs KW - omics KW - biofilm KW - biofouling KW - reverse osmosis KW - membrane KW - RO KW - time-series KW - meta-transcriptomic KW - metagenomic KW - metaproteomic KW - metabolomic KW - innocuous KW - detrimental KW - omic LA - English DA - 2021/01/18 PY - 2021 PB - Oak Ridge National Laboratory T1 - Omics Standard Operating Procedures UR - https://data.openei.org/submissions/6467 ER -
Export Citation to RIS
May, Amanda, et al. Omics Standard Operating Procedures. Oak Ridge National Laboratory, 18 January, 2021, NAWI. https://waterdams.nawihub.org/submissions/10.
May, A., Stadler, L., Podar, M., Kumar, M., & Alvarez, P. (2021). Omics Standard Operating Procedures. [Data set]. NAWI. Oak Ridge National Laboratory. https://waterdams.nawihub.org/submissions/10
May, Amanda, Lauren Stadler, Mircea Podar, Manish Kumar, and Pedro Alvarez. Omics Standard Operating Procedures. Oak Ridge National Laboratory, January, 18, 2021. Distributed by NAWI. https://waterdams.nawihub.org/submissions/10
@misc{OEDI_Dataset_6467, title = {Omics Standard Operating Procedures}, author = {May, Amanda and Stadler, Lauren and Podar, Mircea and Kumar, Manish and Alvarez, Pedro}, abstractNote = {This living document will illustrate Standard Operating Procedures (SOPs) for sampling biofilm material from reverse osmosis (RO) membrane modules. The SOPs will empower the NAWI research community to apply omics tools (e.g., time-series metagenomic, meta-transcriptomic, metaproteomic and metabolomic workflows) to fundamentally understand biofilm formation with unprecedented resolution (e.g., the transition from innocuous to detrimental biofilm) and mitigate biofouling in water treatment and distribution systems.}, url = {https://waterdams.nawihub.org/submissions/10}, year = {2021}, howpublished = {NAWI, Oak Ridge National Laboratory, https://waterdams.nawihub.org/submissions/10}, note = {Accessed: 2025-05-03} }

Details

Data from Jan 18, 2021

Last updated Mar 1, 2022

Submitted Jan 21, 2021

Organization

Oak Ridge National Laboratory

Contact

Frank Loeffler

865.974.4933

Authors

Amanda May

University of Tennessee

Lauren Stadler

Rice University

Mircea Podar

Oak Ridge National Laboratory

Manish Kumar

University of Texas Austin

Pedro Alvarez

Rice University

DOE Project Details

Project Name NAWI Integrated Data and Analysis

Project Lead Melissa Klembara

Project Number 36496

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