Omics Standard Operating Procedures
This living document will illustrate Standard Operating Procedures (SOPs) for sampling biofilm material from reverse osmosis (RO) membrane modules. The SOPs will empower the NAWI research community to apply omics tools (e.g., time-series metagenomic, meta-transcriptomic, metaproteomic and metabolomic workflows) to fundamentally understand biofilm formation with unprecedented resolution (e.g., the transition from innocuous to detrimental biofilm) and mitigate biofouling in water treatment and distribution systems.
Citation Formats
Oak Ridge National Laboratory. (2021). Omics Standard Operating Procedures [data set]. Retrieved from https://waterdams.nawihub.org/submissions/10.
May, Amanda, Stadler, Lauren, Podar, Mircea, Kumar, Manish, and Alvarez, Pedro. Omics Standard Operating Procedures. United States: N.p., 18 Jan, 2021. Web. https://waterdams.nawihub.org/submissions/10.
May, Amanda, Stadler, Lauren, Podar, Mircea, Kumar, Manish, & Alvarez, Pedro. Omics Standard Operating Procedures. United States. https://waterdams.nawihub.org/submissions/10
May, Amanda, Stadler, Lauren, Podar, Mircea, Kumar, Manish, and Alvarez, Pedro. 2021. "Omics Standard Operating Procedures". United States. https://waterdams.nawihub.org/submissions/10.
@div{oedi_5670, title = {Omics Standard Operating Procedures}, author = {May, Amanda, Stadler, Lauren, Podar, Mircea, Kumar, Manish, and Alvarez, Pedro.}, abstractNote = {This living document will illustrate Standard Operating Procedures (SOPs) for sampling biofilm material from reverse osmosis (RO) membrane modules. The SOPs will empower the NAWI research community to apply omics tools (e.g., time-series metagenomic, meta-transcriptomic, metaproteomic and metabolomic workflows) to fundamentally understand biofilm formation with unprecedented resolution (e.g., the transition from innocuous to detrimental biofilm) and mitigate biofouling in water treatment and distribution systems.}, doi = {}, url = {https://waterdams.nawihub.org/submissions/10}, journal = {}, number = , volume = , place = {United States}, year = {2021}, month = {01}}
Details
Data from Jan 18, 2021
Last updated Mar 1, 2022
Submitted Jan 21, 2021
Organization
Oak Ridge National Laboratory
Contact
Frank Loeffler
865.974.4933
Authors
Original Source
https://waterdams.nawihub.org/submissions/10Keywords
NAWI, desalination, water, Biofilms, Omics analyses, SOPs, omics, biofilm, biofouling, reverse osmosis, membrane, RO, time-series, meta-transcriptomic, metagenomic, metaproteomic, metabolomic, innocuous, detrimental, omicDOE Project Details
Project Name NAWI Integrated Data and Analysis
Project Lead Melissa Klembara
Project Number 36496